Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX463566: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-316278' containing sample 'Staphylococcus aureus H56219'
2 ILLUMINA (Illumina HiSeq 2000) runs: 4.8M spots, 975.7M bases, 467.4Mb downloads

UUID: 9cb7869e-b876-4c25-8096-83fdead5e9bf

Design: Illumina sequencing of Staphylococcus aureus H56219 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA CLEAR

PRJNA226918 • SRP036506 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus H56219

SAMN02398856 • SRS552273 • All experiments • All runs

Organism: Staphylococcus aureus H56219

Library:

Name: Pond-316278

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 463558.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5BC99

material_type: DNA:DNA Somatic

product_order: PDO-2426

product_part_number: P-WG-0004

project: G52157

research_project: RP-509

root_sample_id: SM-4T65I

sample_id: SM-5BC99

work_request: 39164

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-01-27 21:23:52.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 4.8M spots, 975.7M bases, 467.4Mb

Run	# of Spots	# of Bases	Size	Published
SRR1159754	2,423,980	489.6M	234.5Mb	2014-02-04
SRR1163118	2,406,202	486.1M	232.9Mb	2014-02-06

ID:: 643734

SRA

Sequence Read Archive

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